How to teach Evolution to undergraduates

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At the Technion, I taught for many years a course on Evolution, of which I am very proud.

The first half introduces the main mechanisms of evolution—natural selection and genetic drift—and the second explores how evolution occurs in many topics, each of which could fill up an entire course by itself.

I’m happy to make are powerpoint slides available for everyone (links below). I think they can be used for anyone learning by themselves or setting up a similar course.

The main text is the Barton et al. Evolution book, but it is really only very loosely based upon it. There are also many influences of Jerry Coyne’s Why Evolution is True, Stephen Stearn’s Yale course, Richard Dawkins, the work of Richard Lenski, among many others. Each lecture also summarizes a chapter of Darwin’s The Origin of Species.

  1. Introduction to Evolutionary Biology – Aristotle/Lamarck/Darwin
  2. Common Descent
  3. Genetic Variation and Genetic Drift
  4. Natural Selection
  5. Measuring Natural Selection
  6. Genome Evolution
  7. Fossil Record
  8. Experimental Evolution – The Lenski Experiment
  9. Speciation
  10. Biogeography
  11. Evolution of Development
  12. Origin of Life and Sexual Selection
  13. Human Evolution

Enjoy and feel free to contact me about it.

Itai Yanai, yanai.itai[at]gmail.com

 

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The New Scientist review: “Teaming with life”

mg22930561.000-1_800.jpgNew Scientist reviews The Society of Genes

The Society of Genes: Time for a subtler picture of evolution

By Bob Holmes

FORTY years ago, Richard Dawkins’ book The Selfish Gene popularised the notion that the gene, rather than the individual, was the true unit of evolution. That view has dominated evolutionary genetics ever since. But in The Society of Genes, biologists Itai Yanai and Martin Lercher say that it’s time to replace the selfish-gene metaphor with a new one that focuses on relationships.

“We are not the simple sum of our genes,” they write. “The members of the society of genes do not live in isolation. Working together, forming rivalries and partnerships, is the only way they can form a human body that can sustain them for a few decades and propel them into the next generation of humanity.”

Their book is not a dry academic argument. Instead, Yanai and Lercher use the idea of a society of genes as a vantage point from which to reintroduce the entire field of evolutionary genetics. It is analogous to modern society, which is full of cooperative and competitive interactions. As in any industry, some genes are workers and builders, while others manage the operation as a whole. This helps us understand the complex genetic networks regulating metabolism and development, where many genes work together and each has multiple functions.

The authors also hope this will give non-specialist readers a more secure grasp of the intricate and often surprising adaptations undergone by living organisms.

Cancer – to take a familiar example – is best understood as a disease of the genome: a breakdown of the usual checks and balances among genes that keep cells from dividing more than they should. No single malfunctioning gene causes cancer. Instead, several members of the society of genes need to fail in order for a tumour to form.

Other chapters apply this to the genetics of immune systems, the evolutionary benefits of sexual reproduction, genetic differences among human populations, the origin of life and more. Many of these insights will be familiar to readers with a good background in evolutionary biology. But even experienced readers are likely to encounter perspectives that are unexpected enough to make the book worth their effort.

For example, the authors speculate why so many elite athletes are of African descent. Because early humans evolved on that continent, Africa still has more genetic diversity than all other continents combined. So, to the extent that genes determine performance, the best genes for any given skill – sprinting, throwing – are likely to be found in Africa. Since genes also affect intelligence, the best chess players ought someday also to come from African ancestry, they suggest. And – although they don’t say it outright – the brightest scientists, too.

The idea of genes working together is nothing new, of course. Four decades ago, Dawkins himself acknowledged that the selfishness of individual genes is tempered by their need to cooperate to keep their carrier organism alive and well. What Yanai and Lercher’s metaphor shift does is revalue those networks of competition and cooperation. They are no longer afterthoughts: rather, they are the centrepiece of our understanding.

Yanai and Lercher take care to assume no prior knowledge, explaining even elementary concepts such as the gene, natural selection and heredity. Readers meeting biology for the first time will be well served by this richer, more nuanced, way of viewing genetics, while those with a deeper background will find plenty of interest, notably in the vivid clarity of the explanations.

(Image: Alexander Nemenov/AFP/Getty Images)

The Society of Genes

Itai Yanai and Martin Lercher

Harvard University Press

A song on The Society of Genes

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From the book launch party at Radcliffe, Harvard University (February 3rd, 2016).

Come gather round and listen to
How our lives are inextricably
Linked to genes that form a society.

Kevin Bacon’s six degrees are outshone
By our genes’ complexity
No gene is an island in society.

Society, Society, The Society of Genes.
Together and in conflict,
Ain’t it babe like you and me?

With genomes near identical, millions
of differences separate you and me
That’s Bill Clinton’s paradox about society.

And when we find a mate, we’re busy
helping our genes to be wild and free
to live the American Dream in their society.

Society, Society, The Society of Genes.
Together and in conflict,
Ain’t it babe like you and me?

A human and a chimp can’t marry
The lock no longer fits the key
Cooperation long broke down ‘twixt their societies

How do genes make a body?
There are managers that oversee.
Giving orders to the workers, of Society

Society, Society, The Society of Genes.
Together and in conflict,
Ain’t it babe like you and me?

Mediocre artists tend to copy,
But the greatest of them steal, you see
That’s how novelty arises in society

Normal creatures are bacteria
We’re just curious absurdities
A merger of two societies

Society, Society, The Society of Genes.
Together and in conflict,
Ain’t it babe like you and me?

Like Kramer freeloads off of Seinfeld
Millions freeload off of me
It’s the largest tribe of genes in society

And when you ask your genome: buddy,
What’s your secret recipe?
There will be an answer: Society.

Society, Society, The Society of Genes.
Together and in conflict,
Ain’t it babe like you and me?